[XtalOpt-devel] problem initiating Xtalopt on Ubuntu

[Wei Lai]

There is no ouput for that. "cat /proc/cpuinfo" give the following:

processor : 0
vendor_id : GenuineIntel
cpu family : 6
model : 23
model name : Intel(R) Core(TM)2 Duo CPU     E8400  @ 3.00GHz
stepping : 10
microcode : 0xa0b
cpu MHz : 2999.659
cache size : 6144 KB
fdiv_bug : no
hlt_bug : no
f00f_bug : no
coma_bug : no
fpu : yes
fpu_exception : yes
cpuid level : 13
wp : yes
flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat
pse36 clflush dts acpi mmx fxsr sse sse2 ss nx lm constant_tsc up
arch_perfmon pebs bts xtopology tsc_reliable nonstop_tsc aperfmperf pni
ssse3 cx16 sse4_1 xsave hypervisor lahf_lm dts
bogomips : 5999.31
clflush size : 64
cache_alignment : 64
address sizes : 40 bits physical, 48 bits virtual
power management:

Wei

On Mon, Jun 18, 2012 at 11:58 AM, David Lonie <loniedavid at gmail.com> wrote:

> Hmm, that version of Qt should be ok. What is the output of "cat
> /proc/cpuinfo |grep core\ id"?
>
> On Mon, Jun 18, 2012 at 11:54 AM, Wei Lai <laiwei at msu.edu> wrote:
> > Dear Dvid,
> >
> > Here is the output.
> >
> > QMake version 2.01a
> > Using Qt version 4.8.1 in /usr/lib/i386-linux-gnu
> >
> > Regards, Wei
> >
> > On Mon, Jun 18, 2012 at 11:50 AM, David Lonie <loniedavid at gmail.com>
> wrote:
> >>
> >> Hi Wei,
> >>
> >> There was a bug in Qt that caused similar behavior on certain
> >> versions, this may be another instance of this. What is the output of
> >> "qmake --version"?
> >>
> >> Dave
> >>
> >> On Mon, Jun 18, 2012 at 11:44 AM, Wei Lai <laiwei at msu.edu> wrote:
> >> > Dear Users,
> >> >
> >> > I was able to install Xtalopt on 32-bit Ubuntu 12.04 and see the
> Xtalopt
> >> > GUI. When I was going through the TiO2 tutorial and pressed "Begin",
> it
> >> > seems that the structures couldn't be initiated and Xtalopt simply was
> >> > hanging up at "Waitg for structures to initialize (0 of 5)". I am
> >> > copying
> >> > the screen message as the following:
> >> >
> >> > "Avogadro version: 1.1.0 Git: e982c89
> >> > LibAvogadro version: 1.1.0 Git: e982c89"
> >> > Locale:  "en_US"
> >> > Libavogadro translations not found.
> >> > System has OpenGL support.
> >> > About to test OpenGL capabilities.
> >> > OpenGL capabilities found:
> >> > Double Buffering.
> >> > Direct Rendering.
> >> > Antialiasing.
> >> > void DBusMenuExporterPrivate::addAction(QAction*, int): Already
> tracking
> >> > action "" under id 61
> >> > void DBusMenuExporterPrivate::addAction(QAction*, int): Already
> tracking
> >> > action "" under id 62
> >> > Loading plugins: "/home/wl/bin/../lib/avogadro/1_1"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1/colors"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1/engines"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1/extensions"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1/tools"
> >> > Searching for plugins in "/home/wl/lib/avogadro/1_1/contrib"
> >> > Loading plugins: "/home/wl/.avogadro/1_1/plugins"
> >> > Settings are missing for the next engines: ("Ball and Stick", "Axes",
> >> > "Cartoon", "Dipole", "Force", "Hydrogen Bond", "Label", "Overlay",
> >> > "Polygon", "QTAIM", "Ribbon", "Ring", "Simple Wireframe", "Van der
> Waals
> >> > Spheres", "Stick", "Surfaces", "Wireframe")
> >> > QStackedLayout::setCurrentWidget: Widget 0x94e0f60 not contained in
> >> > stack
> >> > dev warning: Extension "GAMESS" is using a deprecated DockWidget
> loading
> >> > method. See Extension::dockWidgets() documentation.
> >> > dev warning: Extension "Orbitals" is using a deprecated DockWidget
> >> > loading
> >> > method. See Extension::dockWidgets() documentation.
> >> > dev warning: Extension "Vibration" is using a deprecated DockWidget
> >> > loading
> >> > method. See Extension::dockWidgets() documentation.
> >> > PreCalculate
> >> > Finished queue.
> >> > GLWidget initialisation...
> >> > GLWidget initialised...
> >> > createObjects()
> >> > libpng warning: Ignoring attempt to set cHRM RGB triangle with zero
> area
> >> > x1 and x2 cannot be equal. Centering around point.
> >> > y1 and y2 cannot be equal. Centering around point.
> >> > Debug:  "Starting optimization."
> >> > QObject::moveToThread: Current thread (0x8fdec48) is not the object's
> >> > thread
> >> > (0x9115378).
> >> > Cannot move to target thread (0x8e5b2f8)
> >> >
> >> > New structure accepted ( "1x1" )
> >> > QObject::moveToThread: Current thread (0x8fdec48) is not the object's
> >> > thread
> >> > (0x9115378).
> >> > Cannot move to target thread (0x8e5b2f8)
> >> >
> >> > New structure accepted ( "1x2" )
> >> > QObject::moveToThread: Current thread (0x8fdec48) is not the object's
> >> > thread
> >> > (0x9115378).
> >> > Cannot move to target thread (0x8e5b2f8)
> >> >
> >> > New structure accepted ( "1x3" )
> >> > QObject::moveToThread: Current thread (0x8fdec48) is not the object's
> >> > thread
> >> > (0x9115378).
> >> > Cannot move to target thread (0x8e5b2f8)
> >> >
> >> > New structure accepted ( "1x4" )
> >> > QObject::moveToThread: Current thread (0x8fdec48) is not the object's
> >> > thread
> >> > (0x9115378).
> >> > Cannot move to target thread (0x8e5b2f8)
> >> >
> >> > New structure accepted ( "1x5" )
> >> >
> >> >
> >> > Thanks.
> >> >
> >> > Regards, Wei
> >> >
> >> > _______________________________________________
> >> > XtalOpt-Devel mailing list
> >> > XtalOpt-Devel at lists.openmolecules.net
> >> >
> >> >
> http://lists.openmolecules.net/listinfo.cgi/xtalopt-devel-openmolecules.net
> >> >
> >
> >
>
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